C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: HOP homeobox
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000554144 HOPX-201 ENSG00000171476 9606 - 4:56647989-56681706 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008G9 CIL_0008G9_0001 VISTA 4:56396035-56999166
CIL_0001WR CIL_0001WR_0001 CGP 4:56530609-56681899

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000122 IEA negative regulation of transcription from RNA polymerase II promoter
GO:0001829 IDA trophectodermal cell differentiation
GO:0003677 IEA DNA binding
GO:0005515 IEA protein binding
GO:0005634 IDA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0007507 IEA heart development
GO:0008016 IEA regulation of heart contraction
GO:0016575 IEA histone deacetylation
GO:0043393 IEA regulation of protein binding
GO:0043415 IEA positive regulation of skeletal muscle tissue regeneration
GO:0045596 IDA negative regulation of cell differentiation
GO:0048286 IEA lung alveolus development
GO:0051155 IEA positive regulation of striated muscle cell differentiation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000081964 Hopx-001 protein_coding Mus_musculus 0 206

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