C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: YY1 transcription factor
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000554804 YY1-004 ENSG00000100811 9606 + 14:100239759-100278142 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartLiverMuscleOvaryPlacentaTestisENST00000554804
Transcript ID Heart Liver Muscle Ovary Placenta Testis
ENST00000554804 5.584±4.18 6.933±0.00 13.173±0.00 9.302±0.00 11.762±1.67 15.980±1.98

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00032R CIL_00032R_0001 CGP 14:100143957-100282792
CIL_0004AD CIL_0004AD_0001 CGP 14:100238298-100306547

Gene Ontology

GO IDEvidence TypeGO Description
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000021692 Yy1-001 protein_coding Mus_musculus 0 1177
ENSMUST00000126912 Yy1-002 retained_intron Mus_musculus 0 366
ENSMUST00000179062 Mbtps2-201 protein_coding Mus_musculus 0 211
ENSMUST00000112522 Mbtps2-003 protein_coding Mus_musculus 0 211
ENSMUST00000065806 Yy2-001 protein_coding Mus_musculus 0 211
ENSDART00000038745 yy1b-001 protein_coding Danio_rerio 0 189
ENSDART00000148632 yy1b-002 protein_coding Danio_rerio 1e-32 145

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