C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | orthodenticle homeobox 2 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000554845  |
OTX2-006 |
ENSG00000165588 |
9606 | - |
14:56801913-56805648  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_000602 | CIL_000602_0002 | CGP | 14:56488354-56810479 |
| CIL_0007P7 | CIL_0007P7_0001 | UCNEbase | 14:56513836-57292417 |
| CIL_00083W | CIL_00083W_0001 | VISTA | 14:56553946-57157601 |
| CIL_000869 | CIL_000869_0001 | VISTA | 14:56652290-57254727 |
| CIL_0009BX | CIL_0009BX_0001 | VISTA | 14:56664169-57265628 |
| CIL_000822 | CIL_000822_0001 | VISTA | 14:56707426-57311372 |
| CIL_0005ZZ | CIL_0005ZZ_0002 | CGP | 14:56799905-57269008 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0003677 | IEA | DNA binding |
| GO:0003700 | IEA | sequence-specific DNA binding transcription factor activity |
| GO:0005634 | IEA | nucleus |
| GO:0007275 | IEA | multicellular organismal development |
| GO:0043565 | IEA | sequence-specific DNA binding |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000119070
|
Otx2-002 | protein_coding | Mus_musculus | 0 | 1212 |
|
ENSMUST00000122009
|
Otx2-003 | protein_coding | Mus_musculus | 0 | 1162 |
|
ENSMUST00000118578
|
Otx2-001 | protein_coding | Mus_musculus | 0 | 1070 |
|
ENSMUST00000152018
|
Otx2-004 | protein_coding | Mus_musculus | 0 | 957 |
|
ENSMUST00000135279
|
Otx2-005 | protein_coding | Mus_musculus | 0 | 835 |
|
ENSMUST00000144465
|
Otx2-007 | protein_coding | Mus_musculus | 0 | 562 |
|
ENSMUST00000133479
|
Otx2-006 | protein_coding | Mus_musculus | 0 | 302 |
|
ENSMUST00000119739
|
Otx2-008 | protein_coding | Mus_musculus | 0 | 292 |
