C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: short stature homeobox
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000554971 SHOX-003 ENSG00000185960 9606 + X:630807-645568 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainColonKidneyLiverLungMuscleOvaryPlacentaTestisENST00000554971
Transcript ID Adipose Brain Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000554971 0.725±0.00 0.054±0.00 0.062±0.00 0.312±0.00 0.061±0.00 0.042±0.00 0.229±0.00 0.024±0.00 0.267±0.02 0.155±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00027Q CIL_00027Q_0002 CGP X:333963-659411

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001501 TAS skeletal system development
GO:0003677 IEA DNA binding
GO:0003700 TAS sequence-specific DNA binding transcription factor activity
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006366 TAS transcription from RNA polymerase II promoter
GO:0043565 IEA sequence-specific DNA binding

Homologs

No Homologs available.

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