C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein S3A pseudogene 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000555161 RPS3AP4-001 ENSG00000259105 9606 + 14:35468272-35469330 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastLungOvaryTestisENST00000555161
Transcript ID Adipose Adrenal Brain Breast Lung Ovary Testis
ENST00000555161 0.028±0.00 0.043±0.00 0.041±0.00 0.014±0.00 0.013±0.00 0.017±0.00 0.013±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008MF CIL_0008MF_0001 VISTA 14:35250818-35851792
CIL_0008ME CIL_0008ME_0001 VISTA 14:35273755-35874460

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000121639 Gm13508-001 processed_pseudogene Mus_musculus 0 418
ENSMUST00000186012 RP24-117M7.2-001 processed_pseudogene Mus_musculus 0 294

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