C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: myosin VA (heavy chain 12, myoxin)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000556196 MYO5A-006 ENSG00000197535 9606 - 15:52367085-52528880 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; LungMuscleOvaryENST00000556196
Transcript ID Lung Muscle Ovary
ENST00000556196 3.504±0.00 0.612±0.00 1.102±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003774 IEA motor activity
GO:0005524 IEA ATP binding
GO:0008152 IEA metabolic process
GO:0051015 IEA actin filament binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000123531 Myo5a-010 nonsense_mediated_decay Mus_musculus 0 3956
ENSMUST00000136731 Myo5a-009 protein_coding Mus_musculus 0 3703
ENSMUST00000155282 Myo5a-003 protein_coding Mus_musculus 0 3703
ENSMUST00000123128 Myo5a-001 protein_coding Mus_musculus 0 3703
ENSDART00000133618 myo5aa-001 protein_coding Danio_rerio 0 1048
ENSDART00000148541 myo5aa-003 protein_coding Danio_rerio 0 1048
ENSDART00000088037 myo5aa-201 protein_coding Danio_rerio 0 1035
ENSMUST00000142181 Myo5a-008 retained_intron Mus_musculus 0 652
ENSMUST00000136871 Myo5a-006 retained_intron Mus_musculus 0 422

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