C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000556703 RP11-613G13.1-001 ENSG00000258758 9606 + 14:57040885-57042504 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; LiverOvaryTestisENST00000556703
Transcript ID Liver Ovary Testis
ENST00000556703 0.006±0.00 0.016±0.00 0.032±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007P7 CIL_0007P7_0001 UCNEbase 14:56513836-57292417
CIL_00083W CIL_00083W_0001 VISTA 14:56553946-57157601
CIL_000869 CIL_000869_0001 VISTA 14:56652290-57254727
CIL_0009BX CIL_0009BX_0001 VISTA 14:56664169-57265628
CIL_000822 CIL_000822_0001 VISTA 14:56707426-57311372
CIL_0005ZZ CIL_0005ZZ_0002 CGP 14:56799905-57269008

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000107824 Zcchc7-003 protein_coding Mus_musculus 0 741
ENSMUST00000067521 Zcchc7-004 retained_intron Mus_musculus 0 632
ENSMUST00000144436 Zcchc7-005 retained_intron Mus_musculus 0 632
ENSMUST00000142714 Zcchc7-006 nonsense_mediated_decay Mus_musculus 0 436
ENSMUST00000143385 Zcchc7-008 protein_coding Mus_musculus 0 340
ENSMUST00000154121 Zcchc7-007 protein_coding Mus_musculus 1e-33 148

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