C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: mutL homolog 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000556740 MLH3-003 ENSG00000119684 9606 - 14:75016989-75049691 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000556740
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000556740 0.259±0.00 1.650±0.00 2.575±0.00 0.589±0.00 1.221±0.20 0.826±0.62 0.716±0.00 1.212±0.85 1.163±0.00 0.396±0.00 1.343±0.65 1.060±0.53 2.339±0.59

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00084S CIL_00084S_0001 VISTA 14:74936670-75538350
CIL_00085H CIL_00085H_0001 VISTA 14:74957721-75560295
CIL_0007PT CIL_0007PT_0001 VISTA 14:74957738-75560035
CIL_0005OJ CIL_0005OJ_0001 CGP 14:75002911-75051532
CIL_0003FY CIL_0003FY_0001 CGP 14:75013764-75069483

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000795 IBA synaptonemal complex
GO:0003696 TAS satellite DNA binding
GO:0003697 IBA single-stranded DNA binding
GO:0005515 IPI:IEA protein binding
GO:0005524 IEA ATP binding
GO:0005634 TAS nucleus
GO:0005712 IBA chiasma
GO:0006200 IBA ATP catabolic process
GO:0006298 NAS:IEA mismatch repair
GO:0007131 IEA:NAS reciprocal meiotic recombination
GO:0016887 IBA ATPase activity
GO:0030983 IEA mismatched DNA binding
GO:0032300 IBA mismatch repair complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000019378 Mlh3-201 protein_coding Mus_musculus 0 2320
ENSMUST00000166821 Mlh3-202 protein_coding Mus_musculus 0 2320

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