C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RAN binding protein 20 pseudogene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000557256 RANBP20P-001 ENSG00000259144 9606 - 14:20720742-20723127 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainHeartKidneyMuscleOvaryTestisENST00000557256
Transcript ID Adrenal Brain Heart Kidney Muscle Ovary Testis
ENST00000557256 0.020±0.00 0.007±0.00 0.028±0.00 0.007±0.00 0.006±0.00 0.006±0.00 0.465±0.32

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000168189 Xpo6-002 protein_coding Mus_musculus 0 2169
ENSMUST00000167268 Xpo6-019 retained_intron Mus_musculus 0 2156
ENSMUST00000009344 Xpo6-001 protein_coding Mus_musculus 0 2156
ENSMUST00000169059 Xpo6-006 processed_transcript Mus_musculus 0 1284
ENSMUST00000170675 Xpo6-003 processed_transcript Mus_musculus 0 894
ENSMUST00000168649 Xpo6-008 processed_transcript Mus_musculus 0 809
ENSMUST00000164741 Xpo6-016 protein_coding Mus_musculus 0 736
ENSMUST00000166540 Xpo6-017 nonsense_mediated_decay Mus_musculus 0 379
ENSMUST00000166368 Xpo6-015 processed_transcript Mus_musculus 0 309
ENSMUST00000167147 Xpo6-013 nonsense_mediated_decay Mus_musculus 0 272
ENSMUST00000163959 Xpo6-007 protein_coding Mus_musculus 0 235

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