C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: exportin 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000170675 Xpo6-003 ENSMUSG00000000131 10090 - 7:126101721-126160871 processed_transcript

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000170675
Transcript ID Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000170675 8.714±1.18 3.607±0.36 3.092±0.00 5.334±0.47 2.354±0.00 2.579±0.39 4.147±0.17 3.080±0.78 2.629±0.30 2.880±0.85

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005TQ CIL_0005TQ_0002 CGP 7:125878419-126200501
CIL_0005TT CIL_0005TT_0002 CGP 7:126101715-126294999

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000304658 XPO6-001 protein_coding Homo_sapiens 0 3016
ENST00000557256 RANBP20P-001 processed_pseudogene Homo_sapiens 0 894
ENST00000561488 XPO6-016 processed_transcript Homo_sapiens 0 346
ENST00000563138 XPO6-012 retained_intron Homo_sapiens 0 686
ENST00000564337 XPO6-015 processed_transcript Homo_sapiens 0 734
ENST00000564905 XPO6-010 nonsense_mediated_decay Homo_sapiens 0 555
ENST00000565284 XPO6-014 retained_intron Homo_sapiens 0 771
ENST00000565698 XPO6-002 protein_coding Homo_sapiens 0 3016
ENST00000566175 XPO6-017 nonsense_mediated_decay Homo_sapiens 0 289
ENST00000567038 XPO6-005 retained_intron Homo_sapiens 0 449
ENST00000567842 XPO6-011 retained_intron Homo_sapiens 0 573
ENST00000568065 XPO6-007 protein_coding Homo_sapiens 0 436
ENST00000569216 XPO6-008 processed_transcript Homo_sapiens 0 372
ENST00000569315 XPO6-006 protein_coding Homo_sapiens 0 407
ENST00000569973 XPO6-018 processed_transcript Homo_sapiens 0 536
ENST00000570007 XPO6-004 retained_intron Homo_sapiens 0 300
ENST00000570294 XPO6-013 retained_intron Homo_sapiens 0 411
ENST00000573275 XPO6-023 protein_coding Homo_sapiens 0 315
ENST00000573645 XPO6-022 processed_transcript Homo_sapiens 0 438
ENST00000574435 XPO6-024 protein_coding Homo_sapiens 0 634

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