C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: exportin 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000009344 Xpo6-001 ENSMUSG00000000131 10090 - 7:126101716-126200408 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000009344
Transcript ID Adipose Adrenal Breast Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000009344 6.177±0.56 9.712±3.41 6.206±0.87 3.401±0.79 4.993±1.33 3.332±0.88 4.625±0.93 2.105±0.59 5.621±1.82 5.863±0.63 33.692±4.09

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005TQ CIL_0005TQ_0002 CGP 7:125878419-126200501
CIL_0005TT CIL_0005TT_0002 CGP 7:126101715-126294999

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005730 IEA nucleolus
GO:0005737 IEA cytoplasm
GO:0005886 IEA plasma membrane
GO:0006611 IEA protein export from nucleus
GO:0008536 IEA Ran GTPase binding
GO:0008565 IEA protein transporter activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000304658 XPO6-001 protein_coding Homo_sapiens 0 4824
ENST00000557256 RANBP20P-001 processed_pseudogene Homo_sapiens 0 2156
ENST00000561488 XPO6-016 processed_transcript Homo_sapiens 0 346
ENST00000563138 XPO6-012 retained_intron Homo_sapiens 0 667
ENST00000564337 XPO6-015 processed_transcript Homo_sapiens 0 632
ENST00000564905 XPO6-010 nonsense_mediated_decay Homo_sapiens 0 555
ENST00000565284 XPO6-014 retained_intron Homo_sapiens 0 749
ENST00000565698 XPO6-002 protein_coding Homo_sapiens 0 4549
ENST00000566073 XPO6-020 protein_coding Homo_sapiens 0 278
ENST00000566175 XPO6-017 nonsense_mediated_decay Homo_sapiens 0 248
ENST00000567038 XPO6-005 retained_intron Homo_sapiens 0 449
ENST00000567842 XPO6-011 retained_intron Homo_sapiens 0 555
ENST00000568065 XPO6-007 protein_coding Homo_sapiens 0 436
ENST00000569216 XPO6-008 processed_transcript Homo_sapiens 0 372
ENST00000569315 XPO6-006 protein_coding Homo_sapiens 0 407
ENST00000569951 XPO6-021 protein_coding Homo_sapiens 0 226
ENST00000569973 XPO6-018 processed_transcript Homo_sapiens 0 536
ENST00000570007 XPO6-004 retained_intron Homo_sapiens 0 300
ENST00000570033 XPO6-019 protein_coding Homo_sapiens 0 660
ENST00000570294 XPO6-013 retained_intron Homo_sapiens 0 370
ENST00000573275 XPO6-023 protein_coding Homo_sapiens 0 315
ENST00000573645 XPO6-022 processed_transcript Homo_sapiens 0 676
ENST00000574435 XPO6-024 protein_coding Homo_sapiens 0 857

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