C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: SMAD family member 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000558428 SMAD3-009 ENSG00000166949 9606 + 15:67166531-67181420 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008R9 CIL_0008R9_0001 VISTA 15:66606636-67207796
CIL_000471 CIL_000471_0002 CGP 15:66702228-67195195
CIL_0007L5 CIL_0007L5_0001 UCNEbase 15:66906943-67787880
CIL_00046Z CIL_00046Z_0002 CGP 15:67063763-67255195

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005622 IEA intracellular
GO:0006355 IEA regulation of transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000154323 Smad3-002 protein_coding Mus_musculus 0 468
ENSMUST00000034973 Smad3-001 protein_coding Mus_musculus 0 468
ENSMUST00000137713 Smad3-005 protein_coding Mus_musculus 0 462
ENSMUST00000133108 Smad3-004 protein_coding Mus_musculus 3e-30 135

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