C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: APH1B gamma secretase subunit
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000559823 APH1B-009 ENSG00000138613 9606 + 15:63287216-63305910 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; TestisENST00000559823
Transcript ID Testis
ENST00000559823 29.416±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00094O CIL_00094O_0001 VISTA 15:62748846-63351985
CIL_00098V CIL_00098V_0001 VISTA 15:62790346-63394142

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000168309 Aph1b-002 nonsense_mediated_decay Mus_musculus 5e-37 158
ENSMUST00000034934 Aph1b-001 protein_coding Mus_musculus 5e-37 158
ENSMUST00000113730 Aph1b-003 protein_coding Mus_musculus 1e-28 130

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