| Transcript ID | Placenta | Testis |
|---|---|---|
| ENSMUST00000168309 | 0.334±0.10 | 0.299±0.14 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | anterior pharynx defective 1b homolog (C. elegans) | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000168309  |
Aph1b-002 |
ENSMUSG00000032375 |
10090 | - |
9:66775209-66795436  |
nonsense_mediated_decay |
Expression Patterns
|
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_00098V | CIL_00098V_0002 | VISTA | 9:66700483-67304558 |
| CIL_00094O | CIL_00094O_0002 | VISTA | 9:66740666-67343521 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0004175 | IGI | endopeptidase activity |
| GO:0005886 | TAS | plasma membrane |
| GO:0006508 | IGI | proteolysis |
| GO:0007219 | IEA | Notch signaling pathway |
| GO:0016021 | IEA | integral component of membrane |
| GO:0016485 | IEA | protein processing |
| GO:0043085 | IEA | positive regulation of catalytic activity |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000261879
|
APH1B-001 | protein_coding | Homo_sapiens | 0 | 573 |
|
ENST00000380340
|
APH1B-003 | nonsense_mediated_decay | Homo_sapiens | 0 | 424 |
|
ENST00000380343
|
APH1B-002 | protein_coding | Homo_sapiens | 0 | 313 |
|
ENST00000558631
|
APH1B-007 | retained_intron | Homo_sapiens | 0 | 191 |
|
ENST00000559823
|
APH1B-009 | processed_transcript | Homo_sapiens | 5e-37 | 158 |
|
ENST00000559971
|
APH1B-004 | nonsense_mediated_decay | Homo_sapiens | 0 | 424 |
|
ENST00000560353
|
APH1B-005 | protein_coding | Homo_sapiens | 0 | 564 |
|
ENST00000560716
|
APH1B-008 | processed_transcript | Homo_sapiens | 0 | 339 |
|
ENST00000560890
|
APH1B-006 | protein_coding | Homo_sapiens | 0 | 424 |
