C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger protein 280D
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000560002 ZNF280D-005 ENSG00000137871 9606 - 15:56652490-56707318 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderHeartKidneyLungOvaryENST00000560002
Transcript ID Bladder Heart Kidney Lung Ovary
ENST00000560002 1.157±0.00 1.147±0.00 1.803±0.00 4.557±0.00 2.673±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000183410 Zfp280d-020 protein_coding Mus_musculus 0 1862
ENSMUST00000098576 Zfp280d-011 protein_coding Mus_musculus 0 1862
ENSMUST00000184517 Zfp280d-003 protein_coding Mus_musculus 0 1862
ENSMUST00000184036 Zfp280d-001 protein_coding Mus_musculus 0 1803
ENSMUST00000183801 Zfp280d-021 nonsense_mediated_decay Mus_musculus 0 1729
ENSMUST00000184399 Zfp280d-002 nonsense_mediated_decay Mus_musculus 0 1363
ENSMUST00000184053 Zfp280d-010 nonsense_mediated_decay Mus_musculus 0 1201
ENSMUST00000184786 Zfp280d-006 nonsense_mediated_decay Mus_musculus 0 652
ENSMUST00000185020 Zfp280d-007 nonsense_mediated_decay Mus_musculus 0 651
ENSMUST00000184019 Zfp280d-013 protein_coding Mus_musculus 0 427
ENSMUST00000184248 Zfp280d-018 retained_intron Mus_musculus 0 377
ENSMUST00000183459 Zfp280d-009 retained_intron Mus_musculus 7.00649e-45 187
ENSMUST00000183545 Zfp280d-016 retained_intron Mus_musculus 9e-39 167
ENSMUST00000184216 Zfp280d-014 protein_coding Mus_musculus 7e-35 154

Loading