C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger protein 280D
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000184517 Zfp280d-003 ENSMUSG00000038535 10090 + 9:72274879-72341093 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastColonLiverLungOvaryTestisENSMUST00000184517
Transcript ID Adrenal Breast Colon Liver Lung Ovary Testis
ENSMUST00000184517 0.630±0.00 2.005±0.00 0.571±0.18 0.284±0.00 1.501±0.27 1.322±0.27 1.425±0.25

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007TG CIL_0007TG_0002 VISTA 9:71674986-72275900
CIL_0008VA CIL_0008VA_0002 VISTA 9:71675967-72276730
CIL_0004OY CIL_0004OY_0002 CGP 9:71842688-72363777

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0008150 ND biological_process
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000267807 ZNF280D-003 protein_coding Homo_sapiens 0 2516
ENST00000370978 ZNF280C-001 protein_coding Homo_sapiens 0 985
ENST00000447817 ZNF280C-002 protein_coding Homo_sapiens 0 701
ENST00000558002 ZNF280D-004 nonsense_mediated_decay Homo_sapiens 0 1777
ENST00000558067 ZNF280D-006 nonsense_mediated_decay Homo_sapiens 0 1319
ENST00000558320 ZNF280D-002 protein_coding Homo_sapiens 0 556
ENST00000559000 ZNF280D-007 protein_coding Homo_sapiens 0 2335
ENST00000559237 ZNF280D-001 protein_coding Homo_sapiens 0 2386
ENST00000559352 ZNF280D-014 protein_coding Homo_sapiens 0 309
ENST00000560002 ZNF280D-005 nonsense_mediated_decay Homo_sapiens 0 1862
ENST00000560121 ZNF280D-012 retained_intron Homo_sapiens 0 857
ENST00000561126 ZNF280D-011 processed_transcript Homo_sapiens 0 351

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