C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger protein 280D
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000184036 Zfp280d-001 ENSMUSG00000038535 10090 + 9:72274860-72362891 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastOvaryPlacentaTestisENSMUST00000184036
Transcript ID Adrenal Brain Breast Ovary Placenta Testis
ENSMUST00000184036 0.709±0.00 4.045±0.00 1.331±0.38 3.312±0.00 1.442±0.19 3.223±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007TG CIL_0007TG_0002 VISTA 9:71674986-72275900
CIL_0008VA CIL_0008VA_0002 VISTA 9:71675967-72276730
CIL_0004OY CIL_0004OY_0002 CGP 9:71842688-72363777

Gene Ontology

GO IDEvidence TypeGO Description
GO:0008150 ND biological_process
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000267807 ZNF280D-003 protein_coding Homo_sapiens 0 2508
ENST00000370978 ZNF280C-001 protein_coding Homo_sapiens 0 972
ENST00000447817 ZNF280C-002 protein_coding Homo_sapiens 0 686
ENST00000558002 ZNF280D-004 nonsense_mediated_decay Homo_sapiens 0 1670
ENST00000558067 ZNF280D-006 nonsense_mediated_decay Homo_sapiens 0 1319
ENST00000558320 ZNF280D-002 protein_coding Homo_sapiens 0 442
ENST00000559000 ZNF280D-007 protein_coding Homo_sapiens 0 2353
ENST00000559237 ZNF280D-001 protein_coding Homo_sapiens 0 2628
ENST00000559352 ZNF280D-014 protein_coding Homo_sapiens 0 270
ENST00000560002 ZNF280D-005 nonsense_mediated_decay Homo_sapiens 0 1803
ENST00000560121 ZNF280D-012 retained_intron Homo_sapiens 0 857
ENST00000561126 ZNF280D-011 processed_transcript Homo_sapiens 0 351

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