C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: interferon stimulated exonuclease gene 20kDa
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000560741 ISG20-009 ENSG00000172183 9606 + 15:88636153-88655621 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartLiverLungMuscleOvaryPlacentaTestisENST00000560741
Transcript ID Adipose Brain Breast Colon Heart Liver Lung Muscle Ovary Placenta Testis
ENST00000560741 16.537±0.00 0.639±0.27 3.216±0.35 4.851±1.88 0.387±0.04 1.378±0.46 3.337±0.00 1.276±0.00 11.312±7.81 8.542±4.36 3.944±1.38

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00011F CIL_00011F_0001 CGP 15:88621296-88656483
CIL_00011K CIL_00011K_0001 CGP 15:88636153-88875354

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000175 IDA 3'-5'-exoribonuclease activity
GO:0000738 IDA DNA catabolic process, exonucleolytic
GO:0003676 IEA nucleic acid binding
GO:0004527 IMP:IEA exonuclease activity
GO:0005634 IDA nucleus
GO:0005654 TAS nucleoplasm
GO:0005730 IDA nucleolus
GO:0005737 IDA cytoplasm
GO:0006364 IEA rRNA processing
GO:0006401 IDA RNA catabolic process
GO:0008283 TAS cell proliferation
GO:0008310 IDA single-stranded DNA 3'-5' exodeoxyribonuclease activity
GO:0008859 IEA exoribonuclease II activity
GO:0009615 IDA response to virus
GO:0015030 IDA Cajal body
GO:0016605 IDA PML body
GO:0019221 TAS cytokine-mediated signaling pathway
GO:0030619 IDA U1 snRNA binding
GO:0030620 IDA U2 snRNA binding
GO:0034511 IDA U3 snoRNA binding
GO:0045071 IMP negative regulation of viral genome replication
GO:0046872 IEA metal ion binding
GO:0051607 IMP defense response to virus
GO:0060337 TAS type I interferon signaling pathway
GO:0090503 IEA RNA phosphodiester bond hydrolysis, exonucleolytic

Homologs

No Homologs available.

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