C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Meis homeobox 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000561293 MEIS3-007 ENSG00000105419 9606 - 19:47403126-47419288 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008G1 CIL_0008G1_0001 VISTA 19:46806794-47408636

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001077 IEA RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription
GO:0003677 IEA DNA binding
GO:0003682 IEA chromatin binding
GO:0005634 IEA nucleus
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0043565 IDA sequence-specific DNA binding
GO:0045944 IEA positive regulation of transcription from RNA polymerase II promoter
GO:0051897 IEA positive regulation of protein kinase B signaling
GO:2001234 IEA negative regulation of apoptotic signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000002495 Meis3-001 protein_coding Mus_musculus 0 979
ENSMUST00000177156 Meis3-005 nonsense_mediated_decay Mus_musculus 0 979
ENSMUST00000175946 Meis3-004 retained_intron Mus_musculus 0 542
ENSMUST00000176506 Meis3-002 protein_coding Mus_musculus 0 449
ENSMUST00000176446 Meis3-009 nonsense_mediated_decay Mus_musculus 0 241

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