C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: StAR-related lipid transfer (START) domain containing 9
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000562619 STARD9-006 ENSG00000159433 9606 + 15:42689595-42720859 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000562619
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000562619 0.890±0.00 1.870±0.00 1.089±0.00 1.618±0.00 1.824±0.00 0.560±0.00 0.521±0.00 0.080±0.00 1.703±0.00 0.299±0.00 2.119±1.17 0.816±0.23 4.062±1.24

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005PH CIL_0005PH_0001 CGP 15:42548810-42720981
CIL_0005PG CIL_0005PG_0001 CGP 15:42575659-42737126

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0005794 IDA Golgi apparatus

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000180041 Stard9-201 protein_coding Mus_musculus 1.99965e-42 180
ENSMUST00000154193 Stard9-002 nonsense_mediated_decay Mus_musculus 1.99965e-42 180
ENSMUST00000070420 Stard9-003 protein_coding Mus_musculus 1.99965e-42 180
ENSMUST00000140843 Stard9-001 protein_coding Mus_musculus 1.99965e-42 180

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