C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005PG_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000159433-ENSG00000140326 CGP 9606 15:42575659-42737126
GeneTranscriptPositionBiotype
ENSG00000140326 (CDAN1)
codanin 1 		ENST00000356231 (CDAN1-001) 42723562-42737126 protein_coding
ENST00000562465 (CDAN1-002) 42723559-42730764 nonsense_mediated_decay
ENST00000563260 (CDAN1-005) 42736562-42737054 protein_coding
ENST00000563604 (CDAN1-004) 42723562-42725637 retained_intron
ENST00000565930 (CDAN1-003) 42724895-42725539 retained_intron
ENSG00000159433 (STARD9)
StAR-related lipid transfer (START) domain containing 9 		ENST00000290607 (STARD9-001) 42575659-42720981 protein_coding
ENST00000562139 (STARD9-005) 42675496-42682213 retained_intron
ENST00000562619 (STARD9-006) 42689595-42720859 nonsense_mediated_decay
ENST00000563872 (STARD9-002) 42575670-42638151 retained_intron
ENST00000564158 (STARD9-003) 42575659-42673114 retained_intron
ENST00000568493 (STARD9-004) 42629842-42670050 retained_intron
ENST00000569419 (STARD9-007) 42665807-42681587 protein_coding
ENSG00000260282 (EIF4EBP2P2)
eukaryotic translation initiation factor 4E binding protein 2 pseudogene 2 		ENST00000563883 (EIF4EBP2P2-001) 42581156-42581488 processed_pseudogene
ENSG00000274403 (CTD-2036P10.6)
 ENST00000617465 (CTD-2036P10.6-001) 42726583-42727211 antisense
ENSG00000278769 (CTD-2036P10.5)
 ENST00000615831 (CTD-2036P10.5-001) 42724102-42724922 antisense

Homo sapiens Ensembl (GRCh38)

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CIL_0005PG_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000033705-ENSMUSG00000027284 CGP 10090 2:120629126-120850128
GeneTranscriptPositionBiotype
ENSMUSG00000027284 (Cdan1)
congenital dyserythropoietic anemia, type I (human) 		ENSMUST00000110700 (Cdan1-001) 120716522-120731518 protein_coding
ENSMUST00000110701 (Cdan1-201) 120716154-120731517 protein_coding
ENSMUST00000124906 (Cdan1-007) 120722396-120724455 retained_intron
ENSMUST00000126133 (Cdan1-006) 120725611-120727977 retained_intron
ENSMUST00000126753 (Cdan1-008) 120718621-120720553 processed_transcript
ENSMUST00000136725 (Cdan1-004) 120729942-120731490 processed_transcript
ENSMUST00000148285 (Cdan1-002) 120718186-120850128 processed_transcript
ENSMUST00000150860 (Cdan1-003) 120728628-120731506 processed_transcript
ENSMUST00000152692 (Cdan1-005) 120727918-120728638 retained_intron
ENSMUSG00000033705 (Stard9)
START domain containing 9 		ENSMUST00000070420 (Stard9-003) 120701341-120715832 protein_coding
ENSMUST00000129384 (Stard9-005) 120715268-120729365 processed_transcript
ENSMUST00000140843 (Stard9-001) 120684856-120716082 protein_coding
ENSMUST00000141917 (Stard9-006) 120713720-120715880 retained_intron
ENSMUST00000150912 (Stard9-004) 120629126-120682782 protein_coding
ENSMUST00000154193 (Stard9-002) 120704592-120731895 nonsense_mediated_decay
ENSMUST00000180041 (Stard9-201) 120629224-120716082 protein_coding
ENSMUSG00000090100 (Ttbk2)
tau tubulin kinase 2 		ENSMUST00000028740 (Ttbk2-002) 120732816-120850604 protein_coding
ENSMUST00000057135 (Ttbk2-001) 120732816-120850406 protein_coding
ENSMUST00000085840 (Ttbk2-201) 120732816-120850418 protein_coding
ENSMUST00000131389 (Ttbk2-004) 120750234-120850364 protein_coding
ENSMUST00000141921 (Ttbk2-005) 120790340-120850435 processed_transcript
ENSMUST00000143051 (Ttbk2-003) 120745671-120850390 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005PG_0001ENSG00000140326ENST00000356231ENST00000562465ENST00000563260ENST00000563604ENST00000565930ENSG00000159433ENST00000290607ENST00000562139ENST00000562619ENST00000563872ENST00000564158ENST00000568493ENST00000569419ENSG00000260282ENST00000563883ENSG00000274403ENST00000617465ENSG00000278769ENST00000615831CIL_0005PG_0002ENSMUSG00000027284ENSMUST00000110700ENSMUST00000110701ENSMUST00000124906ENSMUST00000126133ENSMUST00000126753ENSMUST00000136725ENSMUST00000148285ENSMUST00000150860ENSMUST00000152692ENSMUSG00000033705ENSMUST00000070420ENSMUST00000129384ENSMUST00000140843ENSMUST00000141917ENSMUST00000150912ENSMUST00000154193ENSMUST00000180041ENSMUSG00000090100ENSMUST00000028740ENSMUST00000057135ENSMUST00000085840ENSMUST00000131389ENSMUST00000141921ENSMUST00000143051
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005PG_0001ENSG00000140326ENST00000356231ENST00000562465ENST00000563604ENST00000565930ENSG00000159433ENST00000290607ENST00000562619ENST00000563872ENST00000564158ENSG00000260282ENST00000563883ENSG00000274403ENST00000617465ENSG00000278769ENST00000615831CIL_0005PG_0002ENSMUSG00000027284ENSMUST00000110700ENSMUST00000110701ENSMUST00000136725ENSMUST00000148285ENSMUSG00000033705ENSMUST00000070420ENSMUST00000140843ENSMUST00000180041ENSMUSG00000090100ENSMUST00000028740ENSMUST00000057135ENSMUST00000085840ENSMUST00000141921ENSMUST00000143051
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000140326 ENST00000356231 1.223±0.00 0.795±0.00 0.112±0.00 0.495±0.00 0.817±0.71 1.051±0.00 0.540±0.00 1.590±0.00 0.549±0.00 0.917±0.00 N/A 2.750±0.64 1.698±0.61 2.262±0.27
ENST00000562465 0.796±0.00 0.979±0.00 N/A 0.415±0.00 N/A 0.788±0.00 N/A 1.297±0.00 0.779±0.00 N/A 0.521±0.00 1.749±0.00 N/A 1.666±0.00
ENST00000563260 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000563604 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.164±0.00 N/A N/A N/A
ENST00000565930 N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.913±0.00 N/A N/A N/A N/A
ENSG00000159433 ENST00000290607 0.485±0.00 0.591±0.00 N/A 0.220±0.04 0.565±0.29 N/A 0.231±0.08 0.127±0.03 N/A 1.352±0.95 N/A 0.588±0.28 0.239±0.01 1.975±0.00
ENST00000562139 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000562619 0.890±0.00 1.870±0.00 N/A 1.089±0.00 1.618±0.00 1.824±0.00 0.560±0.00 0.521±0.00 0.080±0.00 1.703±0.00 0.299±0.00 2.119±1.17 0.816±0.23 4.062±1.24
ENST00000563872 N/A N/A N/A N/A N/A N/A N/A 1.968±0.00 N/A N/A N/A N/A N/A N/A
ENST00000564158 N/A 0.616±0.00 0.205±0.00 0.463±0.00 0.926±0.00 N/A N/A 0.088±0.02 0.908±0.87 N/A N/A 0.900±0.00 N/A N/A
ENST00000568493 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000569419 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000260282 ENST00000563883 0.269±0.00 0.349±0.00 N/A N/A 0.320±0.25 N/A 0.126±0.00 N/A N/A N/A 0.176±0.00 0.328±0.00 N/A N/A
ENSG00000274403 ENST00000617465 0.202±0.00 0.716±0.00 N/A 0.093±0.00 N/A 0.589±0.00 N/A N/A 0.807±0.77 0.399±0.00 N/A 1.040±0.89 0.113±0.02 3.528±2.95
ENSG00000278769 ENST00000615831 1.597±0.00 2.459±0.00 N/A 1.189±0.00 0.989±0.00 2.067±0.00 N/A 1.987±0.00 N/A 2.420±0.00 0.725±0.00 4.404±0.91 2.261±0.00 4.437±0.52
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000027284 ENSMUST00000110700 6.813±0.05 3.276±0.79 N/A 4.262±0.00 4.250±0.93 2.593±0.51 2.319±0.46 2.504±0.40 2.570±2.18 N/A 1.283±0.02 6.304±1.52 2.167±0.04 N/A
ENSMUST00000110701 N/A 2.683±0.45 2.869±0.00 4.179±0.06 3.761±0.63 1.675±0.23 N/A 1.521±0.60 2.295±1.50 N/A N/A 4.848±1.06 1.427±0.09 N/A
ENSMUST00000124906 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000126133 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000126753 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000136725 N/A 10.063±0.45 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000148285 N/A 1.533±0.07 N/A N/A 2.184±0.00 1.014±0.20 1.187±0.00 1.323±0.33 0.599±0.09 N/A 1.098±0.02 3.456±1.33 3.025±0.32 10.375±0.54
ENSMUST00000150860 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000152692 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000033705 ENSMUST00000070420 7.202±1.08 N/A 4.235±0.95 N/A 4.805±1.06 N/A 1.820±0.00 2.352±0.00 N/A 11.520±0.28 N/A 5.821±1.40 3.088±0.00 N/A
ENSMUST00000129384 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000140843 2.630±1.14 2.533±0.00 2.267±0.12 1.882±0.00 1.899±0.21 0.863±0.06 1.098±0.31 0.813±0.06 0.434±0.21 5.366±0.73 0.712±0.19 4.717±2.04 0.916±0.26 6.744±0.34
ENSMUST00000141917 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000150912 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154193 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000180041 N/A 2.047±0.16 N/A N/A 1.933±0.45 0.699±0.00 N/A 0.796±0.09 N/A 4.934±0.00 0.418±0.05 3.320±0.75 N/A N/A
ENSMUSG00000090100 ENSMUST00000028740 N/A N/A N/A 4.346±0.00 N/A N/A N/A N/A N/A N/A 0.728±0.16 4.020±1.43 1.106±0.15 12.042±1.12
ENSMUST00000057135 N/A N/A 2.179±0.34 6.043±2.09 N/A N/A 1.319±0.08 1.406±0.51 N/A N/A 0.832±0.20 1.847±0.00 0.647±0.00 N/A
ENSMUST00000085840 N/A N/A N/A 4.897±1.23 N/A 1.640±0.19 N/A 0.789±0.00 0.545±0.04 N/A 0.952±0.21 N/A 1.220±0.24 N/A
ENSMUST00000131389 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000141921 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 306.108±0.00
ENSMUST00000143051 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 55.568±27.07

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