C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005PH_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000137814-ENSG00000159433 CGP 9606 15:42548810-42720981
GeneTranscriptPositionBiotype
ENSG00000137814 (HAUS2)
HAUS augmin-like complex, subunit 2 		ENST00000260372 (HAUS2-001) 42548810-42569994 protein_coding
ENST00000391623 (HAUS2-003) 42548838-42568930 nonsense_mediated_decay
ENST00000562398 (HAUS2-005) 42548838-42563815 protein_coding
ENST00000563479 (HAUS2-009) 42548838-42566733 nonsense_mediated_decay
ENST00000564279 (HAUS2-004) 42548858-42566630 nonsense_mediated_decay
ENST00000567640 (HAUS2-006) 42548828-42566636 nonsense_mediated_decay
ENST00000568846 (HAUS2-007) 42548834-42561687 protein_coding
ENST00000568876 (HAUS2-002) 42548828-42567858 protein_coding
ENST00000570178 (HAUS2-010) 42548867-42567096 nonsense_mediated_decay
ENST00000607467 (HAUS2-011) 42559384-42561687 protein_coding
ENSG00000159433 (STARD9)
StAR-related lipid transfer (START) domain containing 9 		ENST00000290607 (STARD9-001) 42575659-42720981 protein_coding
ENST00000562139 (STARD9-005) 42675496-42682213 retained_intron
ENST00000562619 (STARD9-006) 42689595-42720859 nonsense_mediated_decay
ENST00000563872 (STARD9-002) 42575670-42638151 retained_intron
ENST00000564158 (STARD9-003) 42575659-42673114 retained_intron
ENST00000568493 (STARD9-004) 42629842-42670050 retained_intron
ENST00000569419 (STARD9-007) 42665807-42681587 protein_coding
ENSG00000260282 (EIF4EBP2P2)
eukaryotic translation initiation factor 4E binding protein 2 pseudogene 2 		ENST00000563883 (EIF4EBP2P2-001) 42581156-42581488 processed_pseudogene
ENSG00000260490 (RP11-265N6.3)
 ENST00000569826 (RP11-265N6.3-001) 42571927-42572433 processed_pseudogene
ENSG00000261822 (RP11-265N6.2)
 ENST00000561902 (RP11-265N6.2-001) 42567031-42569994 antisense
ENST00000567089 (RP11-265N6.2-002) 42569298-42569994 antisense

Homo sapiens Ensembl (GRCh38)

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CIL_0005PH_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000027285-ENSMUSG00000033705 CGP 10090 2:120609383-120731895
GeneTranscriptPositionBiotype
ENSMUSG00000027284 (Cdan1)
congenital dyserythropoietic anemia, type I (human) 		ENSMUST00000110700 (Cdan1-001) 120716522-120731518 protein_coding
ENSMUST00000110701 (Cdan1-201) 120716154-120731517 protein_coding
ENSMUST00000124906 (Cdan1-007) 120722396-120724455 retained_intron
ENSMUST00000126133 (Cdan1-006) 120725611-120727977 retained_intron
ENSMUST00000126753 (Cdan1-008) 120718621-120720553 processed_transcript
ENSMUST00000136725 (Cdan1-004) 120729942-120731490 processed_transcript
ENSMUST00000148285 (Cdan1-002) 120718186-120850128 processed_transcript
ENSMUST00000150860 (Cdan1-003) 120728628-120731506 processed_transcript
ENSMUST00000152692 (Cdan1-005) 120727918-120728638 retained_intron
ENSMUSG00000027285 (Haus2)
HAUS augmin-like complex, subunit 2 		ENSMUST00000028741 (Haus2-003) 120609383-120619906 nonsense_mediated_decay
ENSMUST00000110706 (Haus2-002) 120609595-120621560 protein_coding
ENSMUST00000124187 (Haus2-001) 120609383-120621560 protein_coding
ENSMUSG00000027286 (Lrrc57)
leucine rich repeat containing 57 		ENSMUST00000102496 (Lrrc57-004) 120604238-120609315 protein_coding
ENSMUST00000102497 (Lrrc57-002) 120604238-120609355 protein_coding
ENSMUST00000102498 (Lrrc57-001) 120604238-120609510 protein_coding
ENSMUST00000102499 (Lrrc57-003) 120604238-120609520 protein_coding
ENSMUST00000133612 (Lrrc57-005) 120605970-120609508 protein_coding
ENSMUST00000135465 (Lrrc57-007) 120604819-120607972 protein_coding
ENSMUST00000141932 (Lrrc57-006) 120608818-120609302 retained_intron
ENSMUSG00000033705 (Stard9)
START domain containing 9 		ENSMUST00000070420 (Stard9-003) 120701341-120715832 protein_coding
ENSMUST00000129384 (Stard9-005) 120715268-120729365 processed_transcript
ENSMUST00000140843 (Stard9-001) 120684856-120716082 protein_coding
ENSMUST00000141917 (Stard9-006) 120713720-120715880 retained_intron
ENSMUST00000150912 (Stard9-004) 120629126-120682782 protein_coding
ENSMUST00000154193 (Stard9-002) 120704592-120731895 nonsense_mediated_decay
ENSMUST00000180041 (Stard9-201) 120629224-120716082 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005PH_0001ENSG00000137814ENST00000260372ENST00000391623ENST00000562398ENST00000563479ENST00000564279ENST00000567640ENST00000568846ENST00000568876ENST00000570178ENST00000607467ENSG00000159433ENST00000290607ENST00000562139ENST00000562619ENST00000563872ENST00000564158ENST00000568493ENST00000569419ENSG00000260282ENST00000563883ENSG00000260490ENST00000569826ENSG00000261822ENST00000561902ENST00000567089CIL_0005PH_0002ENSMUSG00000027284ENSMUST00000110700ENSMUST00000110701ENSMUST00000124906ENSMUST00000126133ENSMUST00000126753ENSMUST00000136725ENSMUST00000148285ENSMUST00000150860ENSMUST00000152692ENSMUSG00000027285ENSMUST00000028741ENSMUST00000110706ENSMUST00000124187ENSMUSG00000027286ENSMUST00000102496ENSMUST00000102497ENSMUST00000102498ENSMUST00000102499ENSMUST00000133612ENSMUST00000135465ENSMUST00000141932ENSMUSG00000033705ENSMUST00000070420ENSMUST00000129384ENSMUST00000140843ENSMUST00000141917ENSMUST00000150912ENSMUST00000154193ENSMUST00000180041
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005PH_0001ENSG00000137814ENST00000260372ENST00000391623ENST00000562398ENST00000563479ENST00000567640ENST00000568876ENSG00000159433ENST00000290607ENST00000562619ENST00000563872ENST00000564158ENSG00000260282ENST00000563883ENSG00000260490ENST00000569826ENSG00000261822ENST00000561902ENST00000567089CIL_0005PH_0002ENSMUSG00000027284ENSMUST00000110700ENSMUST00000110701ENSMUST00000136725ENSMUST00000148285ENSMUSG00000027285ENSMUST00000028741ENSMUST00000110706ENSMUST00000124187ENSMUSG00000027286ENSMUST00000102496ENSMUST00000102497ENSMUST00000102498ENSMUST00000102499ENSMUST00000133612ENSMUST00000135465ENSMUSG00000033705ENSMUST00000070420ENSMUST00000140843ENSMUST00000180041
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000137814 ENST00000260372 N/A N/A 0.469±0.00 2.458±1.45 N/A 0.755±0.00 0.481±0.00 0.154±0.00 1.445±0.73 N/A 0.257±0.00 2.737±1.62 1.952±0.70 2.108±0.13
ENST00000391623 2.257±0.00 N/A 0.146±0.00 6.728±0.00 0.381±0.00 1.754±0.00 1.076±0.44 1.687±0.00 N/A N/A 1.844±0.00 1.542±0.25 1.093±0.04 3.256±0.00
ENST00000562398 N/A N/A N/A N/A N/A 1.485±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000563479 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.157±0.00 4.340±0.00 8.119±0.00
ENST00000564279 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000567640 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.833±0.00 N/A N/A N/A
ENST00000568846 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000568876 N/A N/A 0.277±0.00 1.041±0.00 N/A N/A N/A N/A 1.246±0.00 1.162±0.00 N/A N/A N/A N/A
ENST00000570178 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000607467 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000159433 ENST00000290607 0.485±0.00 0.591±0.00 N/A 0.220±0.04 0.565±0.29 N/A 0.231±0.08 0.127±0.03 N/A 1.352±0.95 N/A 0.588±0.28 0.239±0.01 1.975±0.00
ENST00000562139 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000562619 0.890±0.00 1.870±0.00 N/A 1.089±0.00 1.618±0.00 1.824±0.00 0.560±0.00 0.521±0.00 0.080±0.00 1.703±0.00 0.299±0.00 2.119±1.17 0.816±0.23 4.062±1.24
ENST00000563872 N/A N/A N/A N/A N/A N/A N/A 1.968±0.00 N/A N/A N/A N/A N/A N/A
ENST00000564158 N/A 0.616±0.00 0.205±0.00 0.463±0.00 0.926±0.00 N/A N/A 0.088±0.02 0.908±0.87 N/A N/A 0.900±0.00 N/A N/A
ENST00000568493 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000569419 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000260282 ENST00000563883 0.269±0.00 0.349±0.00 N/A N/A 0.320±0.25 N/A 0.126±0.00 N/A N/A N/A 0.176±0.00 0.328±0.00 N/A N/A
ENSG00000260490 ENST00000569826 0.284±0.00 0.076±0.00 N/A 1.127±1.00 0.227±0.00 0.183±0.00 0.110±0.00 0.175±0.00 0.045±0.00 0.238±0.00 0.721±0.00 0.450±0.00 0.081±0.00 0.167±0.03
ENSG00000261822 ENST00000561902 N/A N/A N/A N/A N/A 2.195±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000567089 N/A 4.037±0.00 N/A N/A 6.115±0.00 N/A 2.247±0.00 3.421±0.00 N/A 2.024±0.91 N/A 3.451±0.00 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000027284 ENSMUST00000110700 6.813±0.05 3.276±0.79 N/A 4.262±0.00 4.250±0.93 2.593±0.51 2.319±0.46 2.504±0.40 2.570±2.18 N/A 1.283±0.02 6.304±1.52 2.167±0.04 N/A
ENSMUST00000110701 N/A 2.683±0.45 2.869±0.00 4.179±0.06 3.761±0.63 1.675±0.23 N/A 1.521±0.60 2.295±1.50 N/A N/A 4.848±1.06 1.427±0.09 N/A
ENSMUST00000124906 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000126133 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000126753 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000136725 N/A 10.063±0.45 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000148285 N/A 1.533±0.07 N/A N/A 2.184±0.00 1.014±0.20 1.187±0.00 1.323±0.33 0.599±0.09 N/A 1.098±0.02 3.456±1.33 3.025±0.32 10.375±0.54
ENSMUST00000150860 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000152692 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000027285 ENSMUST00000028741 N/A 1.750±0.00 N/A N/A N/A 0.934±0.00 N/A N/A 1.420±0.22 N/A N/A 1.609±0.30 3.661±0.00 N/A
ENSMUST00000110706 N/A 1.672±0.41 N/A N/A 3.702±1.17 0.825±0.00 N/A N/A 0.772±0.19 N/A 1.300±0.00 2.716±1.25 3.416±1.12 N/A
ENSMUST00000124187 2.748±0.99 N/A 4.627±0.95 6.715±2.98 2.070±0.67 1.478±0.76 2.616±0.70 1.916±0.63 4.323±3.37 3.205±0.69 2.920±0.53 2.488±0.81 4.569±1.61 N/A
ENSMUSG00000027286 ENSMUST00000102496 N/A N/A N/A 7.513±0.00 N/A N/A N/A 1.066±0.06 2.630±0.00 N/A 1.730±0.00 6.034±1.82 6.642±1.34 18.580±0.00
ENSMUST00000102497 2.128±0.46 2.843±0.81 3.789±0.45 6.458±0.48 1.714±0.18 1.625±0.53 1.777±0.44 1.457±0.29 3.571±2.16 2.476±0.63 1.610±0.00 2.369±0.50 5.117±1.66 N/A
ENSMUST00000102498 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.479±0.00 N/A N/A 16.910±1.28
ENSMUST00000102499 1.769±0.37 1.273±0.23 4.023±1.02 3.743±0.00 1.490±0.48 N/A 2.339±0.35 1.342±0.39 0.994±0.15 1.807±0.39 2.096±0.23 1.986±0.00 N/A 13.714±0.00
ENSMUST00000133612 3.402±0.60 2.467±0.62 N/A N/A 3.203±2.39 1.884±0.18 2.759±0.31 2.251±0.31 2.057±0.41 2.915±0.18 N/A 2.357±0.61 N/A 81.619±19.68
ENSMUST00000135465 N/A 4.091±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000141932 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000033705 ENSMUST00000070420 7.202±1.08 N/A 4.235±0.95 N/A 4.805±1.06 N/A 1.820±0.00 2.352±0.00 N/A 11.520±0.28 N/A 5.821±1.40 3.088±0.00 N/A
ENSMUST00000129384 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000140843 2.630±1.14 2.533±0.00 2.267±0.12 1.882±0.00 1.899±0.21 0.863±0.06 1.098±0.31 0.813±0.06 0.434±0.21 5.366±0.73 0.712±0.19 4.717±2.04 0.916±0.26 6.744±0.34
ENSMUST00000141917 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000150912 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154193 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000180041 N/A 2.047±0.16 N/A N/A 1.933±0.45 0.699±0.00 N/A 0.796±0.09 N/A 4.934±0.00 0.418±0.05 3.320±0.75 N/A N/A

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