C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: FTO intronic transcript 1 (non-protein coding)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000563011 FTO-IT1-001 ENSG00000260936 9606 + 16:54039393-54040726 sense_intronic

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartLiverLungMuscleOvaryPlacentaTestisENST00000563011
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Liver Lung Muscle Ovary Placenta Testis
ENST00000563011 0.313±0.00 0.694±0.00 0.899±0.00 0.171±0.00 1.182±0.90 0.448±0.40 0.134±0.07 0.312±0.27 1.752±0.15 0.065±0.00 0.192±0.14 0.142±0.04 0.210±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007ON CIL_0007ON_0002 UCNEbase 16:51906374-55391377
CIL_0007SA CIL_0007SA_0001 VISTA 16:53595301-54195912
CIL_0005OE CIL_0005OE_0001 CGP 16:53597683-54121941
CIL_0007X2 CIL_0007X2_0001 VISTA 16:53614289-54215934
CIL_0007X0 CIL_0007X0_0001 VISTA 16:53652718-54254281
CIL_0007WZ CIL_0007WZ_0001 VISTA 16:53660146-54262031
CIL_0000UO CIL_0000UO_0001 CGP 16:53703963-54286763
CIL_0007S8 CIL_0007S8_0001 VISTA 16:53758702-54360209
CIL_000856 CIL_000856_0001 VISTA 16:53798739-54400045
CIL_0007S7 CIL_0007S7_0001 VISTA 16:53805894-54406356
CIL_0007S6 CIL_0007S6_0001 VISTA 16:53809942-54410955
CIL_000857 CIL_000857_0001 VISTA 16:53915682-54517241
CIL_0007S5 CIL_0007S5_0001 VISTA 16:53989508-54590424
CIL_0007S4 CIL_0007S4_0001 VISTA 16:54016433-54617773

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

No Homologs available.

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