C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: secretory carrier membrane protein 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000563663 SCAMP2-004 ENSG00000140497 9606 - 15:74843764-74873355 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000563663
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000563663 12.232±0.00 16.265±0.00 3.321±0.00 8.979±7.10 11.443±0.00 2.532±2.18 19.328±0.00 6.691±4.52 6.261±4.82 9.782±0.00 37.225±0.00 31.420±0.00 8.269±3.34

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007UD CIL_0007UD_0001 VISTA 15:74278506-74880453
CIL_0005AU CIL_0005AU_0002 CGP 15:74843730-74902219

Gene Ontology

GO IDEvidence TypeGO Description
GO:0015031 IEA protein transport
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000045791 Scamp2-201 protein_coding Mus_musculus 0 274

Loading