C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: BolA-like protein 2 {ECO:0000313|Ensembl:ENSP00000457995}
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000565417 RP11-345J4.5-002 ENSG00000261740 9606 - 16:29443249-29454356 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000565417
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000565417 0.223±0.00 1.229±0.00 0.271±0.13 0.582±0.23 0.259±0.00 0.134±0.03 0.198±0.00 0.070±0.00 0.178±0.00 0.130±0.05 0.176±0.07 0.076±0.04 0.340±0.03

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000179331 Smg1-005 protein_coding Mus_musculus 0 854
ENSMUST00000032891 Smg1-001 protein_coding Mus_musculus 0 854
ENSMUST00000106369 Bola2-002 protein_coding Mus_musculus 9e-33 147
ENSMUST00000130498 Bola2-001 protein_coding Mus_musculus 2e-30 139
ENSMUST00000052145 Bola2-003 processed_transcript Mus_musculus 1e-26 126
ENSMUST00000144571 Bola2-004 retained_intron Mus_musculus 5e-25 121
ENSMUST00000173269 Neu1-002 retained_intron Mus_musculus 0.000001 60

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