C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SRY (sex determining region Y)-box 8
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000566034 SOX8-002 ENSG00000005513 9606 + 16:982086-986978 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastColonHeartKidneyLiverLungOvaryPlacentaENST00000566034
Transcript ID Breast Colon Heart Kidney Liver Lung Ovary Placenta
ENST00000566034 0.131±0.03 0.145±0.03 0.058±0.00 0.131±0.00 0.052±0.00 0.147±0.00 0.095±0.00 0.173±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000025003 Sox8-001 protein_coding Mus_musculus 0 346
ENSDART00000112979 sox10-001 protein_coding Danio_rerio 7e-40 171
ENSDART00000127937 sox9a-201 protein_coding Danio_rerio 9e-29 134
ENSDART00000005676 sox9a-001 protein_coding Danio_rerio 9e-29 134

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