C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: kelch domain containing 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000567298 KLHDC4-005 ENSG00000104731 9606 - 16:87698149-87765972 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalLiverPlacentaTestisENST00000567298
Transcript ID Adrenal Liver Placenta Testis
ENST00000567298 3.442±0.00 0.401±0.00 0.639±0.08 4.042±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008WG CIL_0008WG_0001 VISTA 16:87215497-87815964
CIL_00070Q CIL_00070Q_0001 CGP 16:87406246-87698156
CIL_0002SZ CIL_0002SZ_0001 CGP 16:87601835-87765992
CIL_0002T0 CIL_0002T0_0001 CGP 16:87696485-87869488

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI:IEA protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000045884 Klhdc4-001 protein_coding Mus_musculus 0 1314
ENSMUST00000174709 Klhdc4-002 retained_intron Mus_musculus 0 1258
ENSMUST00000174717 Klhdc4-003 protein_coding Mus_musculus 0 580
ENSMUST00000174665 Klhdc4-004 nonsense_mediated_decay Mus_musculus 0 233
ENSMUST00000172470 Klhdc4-007 retained_intron Mus_musculus 1.99993e-41 176
ENSMUST00000174255 Klhdc4-006 nonsense_mediated_decay Mus_musculus 5.99994e-41 174
ENSMUST00000174192 Klhdc4-005 protein_coding Mus_musculus 2e-40 172

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