C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: gigaxonin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000568107 GAN-001 ENSG00000261609 9606 + 16:81314952-81390884 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000568107
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000568107 1.040±0.00 0.605±0.00 1.955±0.00 1.464±0.08 0.982±0.37 0.474±0.00 0.509±0.05 0.653±0.44 0.826±0.12 0.824±0.25 0.567±0.23 0.324±0.25 0.845±0.13

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00019F CIL_00019F_0001 CGP 16:81238448-81390884
CIL_0001ZR CIL_0001ZR_0001 CGP 16:81314952-81711762

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005515 IPI:IEA protein binding
GO:0005737 IDA cytoplasm
GO:0005856 IEA cytoskeleton
GO:0008219 IEA cell death
GO:0016567 IEA protein ubiquitination
GO:0031463 IDA Cul3-RING ubiquitin ligase complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000064488 Gan-201 protein_coding Mus_musculus 0 2145
ENSMUST00000162997 Gan-001 protein_coding Mus_musculus 0 2141

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