C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: autocrine motility factor receptor, E3 ubiquitin protein ligase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000568325 AMFR-003 ENSG00000159461 9606 - 16:56362023-56364116 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000568325
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000568325 24.945±0.00 32.378±0.00 14.035±0.00 16.724±1.35 18.886±9.86 15.058±2.26 8.920±3.67 44.226±24.69 21.523±9.48 21.194±0.00 77.913±56.23 22.698±7.63 32.009±21.75 76.108±35.57

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00048U CIL_00048U_0001 CGP 16:56191390-56425538
CIL_00048T CIL_00048T_0001 CGP 16:56361452-56452199

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000053766 Amfr-001 protein_coding Mus_musculus 0 601
ENSMUST00000139702 Amfr-003 retained_intron Mus_musculus 0 597
ENSMUST00000137475 Amfr-004 processed_transcript Mus_musculus 0 327

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