C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: ubiquitin protein ligase E3 component n-recognin 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000569066 UBR1-003 ENSG00000159459 9606 - 15:43021085-43037829 nonsense_mediated_decay

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005YF CIL_0005YF_0001 CGP 15:42738734-43106113

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005737 IEA cytoplasm
GO:0008270 IEA zinc ion binding
GO:0016567 IEA protein ubiquitination
GO:0016874 IEA ligase activity
GO:0032007 IMP negative regulation of TOR signaling
GO:0070728 IDA leucine binding
GO:0071233 IDA cellular response to leucine

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000028728 Ubr1-001 protein_coding Mus_musculus 0 534
ENSMUST00000154023 Ubr1-004 processed_transcript Mus_musculus 0 411
ENSMUST00000129790 Ubr1-005 processed_transcript Mus_musculus 0 366

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