C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005YF_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000128881-ENSG00000159459 CGP 9606 15:42738734-43106113
GeneTranscriptPositionBiotype
ENSG00000128881 (TTBK2)
tau tubulin kinase 2 		ENST00000267890 (TTBK2-001) 42738734-42920479 protein_coding
ENST00000562880 (TTBK2-006) 42829941-42908275 protein_coding
ENST00000564431 (TTBK2-007) 42827977-42920761 protein_coding
ENST00000566931 (TTBK2-008) 42829970-42920638 protein_coding
ENST00000567274 (TTBK2-003) 42776950-42920762 protein_coding
ENST00000567485 (TTBK2-005) 42855119-42919788 processed_transcript
ENST00000567840 (TTBK2-002) 42776918-42920809 protein_coding
ENST00000622375 (TTBK2-201) 42744352-42920809 protein_coding
ENSG00000159459 (UBR1)
ubiquitin protein ligase E3 component n-recognin 1 		ENST00000290650 (UBR1-001) 42942897-43106101 protein_coding
ENST00000546274 (UBR1-002) 43015656-43106113 protein_coding
ENST00000562173 (UBR1-008) 42945187-42950574 retained_intron
ENST00000563239 (UBR1-009) 43043344-43106088 nonsense_mediated_decay
ENST00000564540 (UBR1-004) 43021085-43027805 nonsense_mediated_decay
ENST00000566493 (UBR1-007) 42988493-42998199 retained_intron
ENST00000568782 (UBR1-006) 43003254-43015869 processed_transcript
ENST00000569066 (UBR1-003) 43021085-43037829 nonsense_mediated_decay
ENST00000569243 (UBR1-005) 43021081-43026663 protein_coding
ENST00000569337 (UBR1-011) 43082711-43106107 nonsense_mediated_decay
ENST00000569971 (UBR1-010) 43043214-43059804 nonsense_mediated_decay
ENSG00000246283 (CTD-2036P10.3)
 ENST00000500850 (CTD-2036P10.3-001) 42740748-42743202 lincRNA
ENST00000567456 (CTD-2036P10.3-002) 42739118-42742197 lincRNA
ENSG00000254793 (FDPSP4)
farnesyl diphosphate synthase pseudogene 4 		ENST00000534629 (FDPSP4-001) 42939310-42940358 processed_pseudogene
ENSG00000260799 (KRT8P50)
keratin 8 pseudogene 50 		ENST00000562022 (KRT8P50-001) 42800968-42802405 processed_pseudogene
CIL_0005YF_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000090100-ENSMUSG00000027272 CGP 10090 2:120732816-120970715
GeneTranscriptPositionBiotype
ENSMUSG00000027272 (Ubr1)
ubiquitin protein ligase E3 component n-recognin 1 		ENSMUST00000028728 (Ubr1-001) 120860269-120970715 protein_coding
ENSMUST00000129790 (Ubr1-005) 120901594-120915023 processed_transcript
ENSMUST00000133408 (Ubr1-002) 120945458-120970613 retained_intron
ENSMUST00000135891 (Ubr1-006) 120873050-120889849 processed_transcript
ENSMUST00000138824 (Ubr1-003) 120962114-120970692 retained_intron
ENSMUST00000153868 (Ubr1-007) 120862573-120871526 processed_transcript
ENSMUST00000154023 (Ubr1-004) 120921435-120930342 processed_transcript
ENSMUSG00000027284 (Cdan1)
congenital dyserythropoietic anemia, type I (human) 		ENSMUST00000110700 (Cdan1-001) 120716522-120731518 protein_coding
ENSMUST00000110701 (Cdan1-201) 120716154-120731517 protein_coding
ENSMUST00000124906 (Cdan1-007) 120722396-120724455 retained_intron
ENSMUST00000126133 (Cdan1-006) 120725611-120727977 retained_intron
ENSMUST00000126753 (Cdan1-008) 120718621-120720553 processed_transcript
ENSMUST00000136725 (Cdan1-004) 120729942-120731490 processed_transcript
ENSMUST00000148285 (Cdan1-002) 120718186-120850128 processed_transcript
ENSMUST00000150860 (Cdan1-003) 120728628-120731506 processed_transcript
ENSMUST00000152692 (Cdan1-005) 120727918-120728638 retained_intron
ENSMUSG00000087519 (AV039307)
expressed sequence AV039307 		ENSMUST00000124795 (AV039307-001) 120850717-120866689 processed_transcript
ENSMUST00000133643 (AV039307-002) 120850705-120866650 processed_transcript
ENSMUST00000171483 (AV039307-201) 120866328-120866651 processed_transcript
ENSMUSG00000090100 (Ttbk2)
tau tubulin kinase 2 		ENSMUST00000028740 (Ttbk2-002) 120732816-120850604 protein_coding
ENSMUST00000057135 (Ttbk2-001) 120732816-120850406 protein_coding
ENSMUST00000085840 (Ttbk2-201) 120732816-120850418 protein_coding
ENSMUST00000131389 (Ttbk2-004) 120750234-120850364 protein_coding
ENSMUST00000141921 (Ttbk2-005) 120790340-120850435 processed_transcript
ENSMUST00000143051 (Ttbk2-003) 120745671-120850390 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005YF_0001ENSG00000128881ENST00000267890ENST00000562880ENST00000564431ENST00000566931ENST00000567274ENST00000567485ENST00000567840ENST00000622375ENSG00000159459ENST00000290650ENST00000546274ENST00000562173ENST00000563239ENST00000564540ENST00000566493ENST00000568782ENST00000569066ENST00000569243ENST00000569337ENST00000569971ENSG00000246283ENST00000500850ENST00000567456ENSG00000254793ENST00000534629ENSG00000260799ENST00000562022CIL_0005YF_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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005YF_0001ENSG00000128881ENST00000267890ENST00000567840ENST00000622375ENSG00000159459ENST00000290650ENST00000546274ENSG00000246283ENST00000500850ENSG00000254793ENST00000534629ENSG00000260799ENST00000562022CIL_0005YF_0002ENSMUSG00000027272ENSMUST00000028728ENSMUST00000135891ENSMUSG00000027284ENSMUST00000110700ENSMUST00000110701ENSMUST00000136725ENSMUST00000148285ENSMUSG00000087519ENSMUST00000124795ENSMUSG00000090100ENSMUST00000028740ENSMUST00000057135ENSMUST00000085840ENSMUST00000141921ENSMUST00000143051
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000128881 ENST00000267890 1.915±0.00 N/A 1.107±0.00 4.310±1.28 0.188±0.00 1.271±0.04 1.570±0.47 1.032±0.00 1.371±1.18 1.164±0.78 0.255±0.00 0.737±0.39 0.486±0.22 2.158±0.62
ENST00000562880 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000564431 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000566931 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000567274 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000567485 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000567840 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 10.162±0.00
ENST00000622375 N/A N/A 0.600±0.00 N/A 0.979±0.00 0.630±0.00 0.419±0.00 N/A 0.621±0.00 N/A 0.459±0.00 N/A N/A 6.099±2.34
ENSG00000159459 ENST00000290650 2.410±0.00 1.770±0.00 0.771±0.00 2.833±1.01 1.656±0.31 2.259±0.05 2.566±1.43 1.335±0.21 0.988±0.82 1.606±0.72 1.804±1.33 2.758±1.34 1.384±0.02 5.409±1.44
ENST00000546274 N/A N/A 2.299±0.00 N/A 4.226±0.00 1.690±0.00 0.745±0.00 N/A 1.524±0.00 1.872±0.00 N/A 1.906±0.00 N/A N/A
ENST00000562173 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000563239 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000564540 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000566493 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000568782 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000569066 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000569243 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000569337 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000569971 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000246283 ENST00000500850 3.235±0.00 2.828±0.00 1.217±0.00 7.429±1.84 1.555±0.00 3.017±0.00 2.122±1.00 1.679±0.29 1.521±1.15 3.289±0.10 0.951±0.44 2.092±0.94 1.080±0.30 3.928±0.00
ENST00000567456 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000254793 ENST00000534629 N/A 0.148±0.00 N/A 0.261±0.15 0.207±0.00 N/A 0.087±0.03 N/A 0.054±0.00 N/A 0.071±0.00 0.138±0.05 N/A 0.032±0.00
ENSG00000260799 ENST00000562022 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.978±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000027272 ENSMUST00000028728 3.024±0.51 2.829±0.73 4.137±1.44 6.315±3.76 2.891±0.65 1.649±0.45 1.998±0.42 2.840±0.34 2.159±1.55 6.387±0.67 2.696±0.54 3.713±1.75 3.054±0.98 2.517±0.51
ENSMUST00000129790 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000133408 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000135891 9.015±2.13 11.318±1.70 N/A N/A 11.456±1.98 6.524±1.60 4.651±1.49 7.141±1.00 4.217±1.19 18.337±3.66 N/A 14.470±2.46 N/A 4.758±0.00
ENSMUST00000138824 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000153868 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154023 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000027284 ENSMUST00000110700 6.813±0.05 3.276±0.79 N/A 4.262±0.00 4.250±0.93 2.593±0.51 2.319±0.46 2.504±0.40 2.570±2.18 N/A 1.283±0.02 6.304±1.52 2.167±0.04 N/A
ENSMUST00000110701 N/A 2.683±0.45 2.869±0.00 4.179±0.06 3.761±0.63 1.675±0.23 N/A 1.521±0.60 2.295±1.50 N/A N/A 4.848±1.06 1.427±0.09 N/A
ENSMUST00000124906 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000126133 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000126753 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000136725 N/A 10.063±0.45 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000148285 N/A 1.533±0.07 N/A N/A 2.184±0.00 1.014±0.20 1.187±0.00 1.323±0.33 0.599±0.09 N/A 1.098±0.02 3.456±1.33 3.025±0.32 10.375±0.54
ENSMUST00000150860 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000152692 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000087519 ENSMUST00000124795 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.116±2.50
ENSMUST00000133643 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000171483 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000090100 ENSMUST00000028740 N/A N/A N/A 4.346±0.00 N/A N/A N/A N/A N/A N/A 0.728±0.16 4.020±1.43 1.106±0.15 12.042±1.12
ENSMUST00000057135 N/A N/A 2.179±0.34 6.043±2.09 N/A N/A 1.319±0.08 1.406±0.51 N/A N/A 0.832±0.20 1.847±0.00 0.647±0.00 N/A
ENSMUST00000085840 N/A N/A N/A 4.897±1.23 N/A 1.640±0.19 N/A 0.789±0.00 0.545±0.04 N/A 0.952±0.21 N/A 1.220±0.24 N/A
ENSMUST00000131389 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000141921 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 306.108±0.00
ENSMUST00000143051 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 55.568±27.07

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