C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: high mobility group nucleosomal binding domain 2 pseudogene 41
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000569492 HMGN2P41-001 ENSG00000261620 9606 - 16:35802869-35803280 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBreastColonLungMuscleTestisENST00000569492
Transcript ID Adipose Breast Colon Lung Muscle Testis
ENST00000569492 0.090±0.00 0.054±0.00 0.048±0.00 0.055±0.00 0.138±0.00 0.225±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000102552 Hmgn2-003 protein_coding Mus_musculus 0 409
ENSMUST00000102553 Hmgn2-001 protein_coding Mus_musculus 0 409
ENSMUST00000075602 Gm10282-201 protein_coding Mus_musculus 0 409
ENSMUST00000100472 Hmgn2-007 protein_coding Mus_musculus 0 381
ENSMUST00000137456 Hmgn2-010 processed_transcript Mus_musculus 0 379
ENSMUST00000138458 Hmgn2-004 processed_transcript Mus_musculus 0 379
ENSMUST00000105893 Hmgn2-009 protein_coding Mus_musculus 0 379
ENSMUST00000123234 Hmgn2-012 protein_coding Mus_musculus 0 375
ENSMUST00000125266 Hmgn2-011 processed_transcript Mus_musculus 0 375
ENSMUST00000130809 Hmgn2-005 retained_intron Mus_musculus 0 276
ENSMUST00000145025 Hmgn2-002 retained_intron Mus_musculus 0 276
ENSMUST00000136327 Hmgn2-006 protein_coding Mus_musculus 2e-25 119

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