C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: pyruvate kinase, muscle
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000569857 PKM-002 ENSG00000067225 9606 - 15:72202533-72231225 nonsense_mediated_decay

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastColonHeartKidneyLiverLungOvaryENST00000569857
Transcript ID Bladder Breast Colon Heart Kidney Liver Lung Ovary
ENST00000569857 61.074±0.00 24.211±0.00 31.704±0.00 41.351±0.00 4.014±0.00 54.385±0.00 37.245±0.00 52.104±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004GV CIL_0004GV_0002 CGP 15:72199029-72272999

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000287 IEA magnesium ion binding
GO:0003824 IEA catalytic activity
GO:0004743 IEA pyruvate kinase activity
GO:0005737 IDA cytoplasm
GO:0005886 IDA plasma membrane
GO:0006096 IEA glycolytic process
GO:0016310 IEA phosphorylation
GO:0030955 IEA potassium ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000034834 Pkm-201 protein_coding Mus_musculus 0 1668
ENSMUST00000163694 Pkm-202 protein_coding Mus_musculus 0 1550
ENSMUST00000118584 Gm13810-001 processed_pseudogene Mus_musculus 0 1055
ENSMUST00000118061 Gm13812-001 processed_pseudogene Mus_musculus 0 1055
ENSMUST00000121443 Gm16459-001 processed_pseudogene Mus_musculus 0 388
ENSMUST00000165702 Gm17138-001 processed_pseudogene Mus_musculus 0 191

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