C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: secretory carrier membrane protein 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000569904 SCAMP2-012 ENSG00000140497 9606 - 15:74845206-74873302 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastKidneyLungMuscleTestisENST00000569904
Transcript ID Adipose Brain Breast Kidney Lung Muscle Testis
ENST00000569904 18.683±0.00 7.485±0.00 21.178±0.00 19.255±0.00 13.311±0.00 17.284±0.00 12.435±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007UD CIL_0007UD_0001 VISTA 15:74278506-74880453
CIL_0005AU CIL_0005AU_0002 CGP 15:74843730-74902219

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005794 IDA Golgi apparatus
GO:0015031 IEA protein transport
GO:0016021 IEA integral component of membrane
GO:0043231 IDA intracellular membrane-bounded organelle

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000045791 Scamp2-201 protein_coding Mus_musculus 0 830

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