C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: myosin, heavy chain 11, smooth muscle
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000571505 MYH11-004 ENSG00000133392 9606 - 16:15785015-15857028 retained_intron

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006UO CIL_0006UO_0001 CGP 16:15594386-15726353
CIL_0006MU CIL_0006MU_0001 CGP 16:15643267-15857033
CIL_0002TD CIL_0002TD_0001 CGP 16:15703135-15888625

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000124844 Myh9-005 processed_transcript Mus_musculus 0 544
ENSMUST00000129453 Myh9-002 retained_intron Mus_musculus 0 544
ENSMUST00000126796 Myh9-004 retained_intron Mus_musculus 0 544
ENSMUST00000016771 Myh9-001 protein_coding Mus_musculus 0 544
ENSMUST00000134878 Myh9-003 retained_intron Mus_musculus 0 433
ENSDART00000046359 myh10-201 protein_coding Danio_rerio 0 390
ENSDART00000151114 myh10-001 protein_coding Danio_rerio 0 390
ENSDART00000150939 myh10-002 protein_coding Danio_rerio 0 390
ENSDART00000011353 myh9a-201 protein_coding Danio_rerio 0 381
ENSDART00000149823 myh9a-001 protein_coding Danio_rerio 0 381
ENSDART00000105232 myh9a-202 protein_coding Danio_rerio 0 359
ENSMUST00000123101 Myh9-006 nonsense_mediated_decay Mus_musculus 0 283

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