C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: speckle-type POZ protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000572686 SPOP-025 ENSG00000121067 9606 - 17:49599497-49601631 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastColonHeartLiverLungOvaryTestisENST00000572686
Transcript ID Breast Colon Heart Liver Lung Ovary Testis
ENST00000572686 2.174±0.00 1.821±0.00 1.181±0.00 3.379±0.00 4.075±0.00 3.618±1.35 2.340±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000877 CIL_000877_0001 VISTA 17:49438854-50041456
CIL_0009BV CIL_0009BV_0001 VISTA 17:49438877-50041441
CIL_0007QJ CIL_0007QJ_0001 VISTA 17:49459872-50061823
CIL_0004N3 CIL_0004N3_0002 CGP 17:49575858-49678234
CIL_0004N2 CIL_0004N2_0002 CGP 17:49598884-49709014

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000107724 Spop-002 protein_coding Mus_musculus 0 913
ENSMUST00000107722 Spop-001 protein_coding Mus_musculus 0 913

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