C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: dihydroorotate dehydrogenase (quinone)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000572887 DHODH-002 ENSG00000102967 9606 + 16:72008588-72027664 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderColonKidneyLiverOvaryPlacentaTestisENST00000572887
Transcript ID Adipose Adrenal Bladder Colon Kidney Liver Ovary Placenta Testis
ENST00000572887 0.644±0.00 1.255±0.00 0.134±0.00 0.286±0.00 1.457±1.00 3.739±0.00 0.786±0.19 0.167±0.01 1.441±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00098E CIL_00098E_0001 VISTA 16:71920667-72521926
CIL_00098B CIL_00098B_0001 VISTA 16:71941307-72542883

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004152 IEA dihydroorotate dehydrogenase activity
GO:0006207 IEA 'de novo' pyrimidine nucleobase biosynthetic process
GO:0006222 IEA UMP biosynthetic process
GO:0016020 IEA membrane
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000069058 Dhodh-201 protein_coding Mus_musculus 0 1225
ENSMUST00000123605 Dhodh-001 protein_coding Mus_musculus 0 1225
ENSMUST00000143900 Dhodh-002 protein_coding Mus_musculus 0 881
ENSMUST00000125779 Dhodh-008 retained_intron Mus_musculus 0 712
ENSMUST00000133353 Dhodh-005 nonsense_mediated_decay Mus_musculus 0 712
ENSMUST00000146064 Dhodh-004 retained_intron Mus_musculus 0 625
ENSMUST00000142106 Dhodh-009 retained_intron Mus_musculus 0 612
ENSMUST00000131107 Dhodh-003 retained_intron Mus_musculus 0 525
ENSMUST00000150804 Dhodh-007 nonsense_mediated_decay Mus_musculus 0 466
ENSMUST00000128350 Dhodh-006 protein_coding Mus_musculus 0 455
ENSMUST00000124138 Dhodh-010 retained_intron Mus_musculus 0 231
ENSMUST00000145380 Ckmt1-003 retained_intron Mus_musculus 0.000002 60

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