C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: dihydroorotate dehydrogenase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000123605 Dhodh-001 ENSMUSG00000031730 10090 - 8:109593477-109608623 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000123605
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000123605 3.313±0.30 2.298±0.85 4.182±0.90 3.075±1.73 3.090±1.41 1.655±0.68 3.644±0.16 3.079±0.73 3.123±1.94 2.119±0.21 5.761±0.76 3.659±0.66 3.640±3.17 0.963±0.22

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008FG CIL_0008FG_0002 VISTA 8:109010589-109613918
CIL_00098B CIL_00098B_0002 VISTA 8:109116597-109718209
CIL_00098E CIL_00098E_0002 VISTA 8:109136455-109737561

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005739 IDA mitochondrion
GO:0006222 IEA UMP biosynthetic process
GO:0016021 IEA integral component of membrane
GO:0044205 IEA 'de novo' UMP biosynthetic process
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000219240 DHODH-201 protein_coding Homo_sapiens 0 1236
ENST00000571288 DHODH-004 nonsense_mediated_decay Homo_sapiens 0 281
ENST00000571392 DHODH-001 retained_intron Homo_sapiens 0 377
ENST00000572003 DHODH-006 retained_intron Homo_sapiens 0 383
ENST00000572887 DHODH-002 protein_coding Homo_sapiens 0 1225
ENST00000573843 DHODH-005 retained_intron Homo_sapiens 0 281
ENST00000573922 DHODH-008 processed_transcript Homo_sapiens 0 403
ENST00000574309 DHODH-009 protein_coding Homo_sapiens 0 573
ENST00000576145 DHODH-003 protein_coding Homo_sapiens 0 553

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