C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SCO1 cytochrome c oxidase assembly protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000577427 SCO1-002 ENSG00000133028 9606 - 17:10680354-10697530 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000577427
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000577427 6.023±0.00 4.893±0.00 4.903±0.00 5.564±0.08 4.661±1.69 5.648±0.98 5.860±2.46 6.754±1.18 4.762±0.28 3.543±1.29 3.093±1.19 4.865±1.49 9.119±1.73 5.299±0.47

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005507 IEA copper ion binding
GO:0005743 IEA mitochondrial inner membrane
GO:0006825 IEA copper ion transport
GO:0006878 IEA cellular copper ion homeostasis
GO:0008535 IEA respiratory chain complex IV assembly

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000136984 Sco1-003 processed_transcript Mus_musculus 0 442
ENSMUST00000092996 Sco1-001 protein_coding Mus_musculus 0 422
ENSMUST00000108690 Sco1-002 protein_coding Mus_musculus 0 422
ENSMUST00000137779 Sco1-004 processed_transcript Mus_musculus 0 320

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