C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: keratin 39
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000578029 KRT39-002 ENSG00000196859 9606 - 17:40958500-40960697 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastLungPlacentaTestisENST00000578029
Transcript ID Adrenal Breast Lung Placenta Testis
ENST00000578029 0.038±0.00 0.074±0.00 0.118±0.00 0.076±0.00 0.098±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000TM CIL_0000TM_0003 CGP 17:40922696-40966892
CIL_00056U CIL_00056U_000P CGP 17:40958417-40987135

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000107445 Krt39-001 protein_coding Mus_musculus 0 368
ENSMUST00000076948 Krt39-201 protein_coding Mus_musculus 0 361

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