C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | keratin 39 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000578078  |
KRT39-003 |
ENSG00000196859 |
9606 | - |
17:40958462-40966886  |
nonsense_mediated_decay |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0000TM | CIL_0000TM_0003 | CGP | 17:40922696-40966892 |
| CIL_00056U | CIL_00056U_000P | CGP | 17:40958417-40987135 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005198 | IEA | structural molecule activity |
| GO:0005882 | IEA | intermediate filament |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000107445
|
Krt39-001 | protein_coding | Mus_musculus | 0 | 732 |
|
ENSMUST00000076948
|
Krt39-201 | protein_coding | Mus_musculus | 0 | 725 |
|
ENSMUST00000074253
|
Krt40-001 | protein_coding | Mus_musculus | 0.00000000002 | 75 |
|
ENSMUST00000107443
|
Krt40-002 | protein_coding | Mus_musculus | 0.00000005 | 64 |
