C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | thyroid hormone receptor, alpha | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000578218  |
THRA-009 |
ENSG00000126351 |
9606 | + |
17:40062193-40083866  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_00098Y | CIL_00098Y_0001 | VISTA | 17:39768583-40372873 |
| CIL_0002PX | CIL_0002PX_0001 | CGP | 17:40015361-40061215 |
| CIL_0002KL | CIL_0002KL_0001 | CGP | 17:40019097-40093867 |
| CIL_0002L8 | CIL_0002L8_0001 | CGP | 17:40058290-40100725 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0003700 | IEA | sequence-specific DNA binding transcription factor activity |
| GO:0004887 | IEA | thyroid hormone receptor activity |
| GO:0005634 | IEA | nucleus |
| GO:0006351 | IEA | transcription, DNA-templated |
| GO:0006355 | IEA | regulation of transcription, DNA-templated |
| GO:0008270 | IEA | zinc ion binding |
| GO:0043565 | IEA | sequence-specific DNA binding |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000103139
|
Thra-003 | protein_coding | Mus_musculus | 0 | 737 |
|
ENSMUST00000064187
|
Thra-001 | protein_coding | Mus_musculus | 0 | 737 |
|
ENSMUST00000152195
|
Thra-002 | processed_transcript | Mus_musculus | 0 | 686 |
|
ENSMUST00000153043
|
Thra-007 | protein_coding | Mus_musculus | 0 | 634 |
|
ENSMUST00000124072
|
Thra-004 | protein_coding | Mus_musculus | 0 | 442 |
|
ENSMUST00000150693
|
Thra-006 | processed_transcript | Mus_musculus | 0 | 394 |
|
ENSMUST00000153468
|
Thra-009 | processed_transcript | Mus_musculus | 0 | 394 |
|
ENSMUST00000124130
|
Thra-008 | processed_transcript | Mus_musculus | 1e-33 | 147 |
