C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: G protein-coupled receptor kinase interacting ArfGAP 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000578670 GIT1-018 ENSG00000108262 9606 - 17:29574513-29576434 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastENST00000578670
Transcript ID Breast
ENST00000578670 10.475±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009BZ CIL_0009BZ_0001 VISTA 17:29367684-29969856
CIL_000873 CIL_000873_0001 VISTA 17:29367702-29969870
CIL_0004GJ CIL_0004GJ_0002 CGP 17:29573469-29614761

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000100812 Git1-004 protein_coding Mus_musculus 0 780
ENSMUST00000037285 Git1-001 protein_coding Mus_musculus 0 780
ENSDART00000057696 git1-001 protein_coding Danio_rerio 0 200
ENSMUST00000128796 Git1-006 retained_intron Mus_musculus 2e-39 167

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