C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: G protein-coupled receptor kinase-interactor 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000037285 Git1-001 ENSMUSG00000011877 10090 + 11:77493562-77507786 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonKidneyLiverLungOvaryTestisENSMUST00000037285
Transcript ID Adrenal Brain Breast Colon Kidney Liver Lung Ovary Testis
ENSMUST00000037285 13.319±3.07 35.505±3.21 4.125±2.58 12.394±0.00 3.146±0.84 1.400±0.48 8.798±0.00 9.778±0.76 53.093±8.74

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000873 CIL_000873_0002 VISTA 11:77122469-77724441
CIL_0009BZ CIL_0009BZ_0002 VISTA 11:77122483-77724456

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005737 IEA cytoplasm
GO:0005925 IEA focal adhesion
GO:0008060 IEA ARF GTPase activator activity
GO:0008270 IEA zinc ion binding
GO:0016020 IEA membrane
GO:0016235 IEA aggresome
GO:0032312 IEA regulation of ARF GTPase activity
GO:0043547 IEA positive regulation of GTPase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000057696 git1-001 protein_coding Danio_rerio 1e-37 163
ENST00000225394 GIT1-001 protein_coding Homo_sapiens 0 3650
ENST00000335356 GIT1-011 protein_coding Homo_sapiens 0 590
ENST00000354574 GIT2-201 protein_coding Homo_sapiens 9e-30 137
ENST00000355312 GIT2-001 protein_coding Homo_sapiens 1e-29 137
ENST00000361006 GIT2-004 protein_coding Homo_sapiens 1e-29 137
ENST00000394869 GIT1-003 protein_coding Homo_sapiens 0 3792
ENST00000457474 GIT2-010 protein_coding Homo_sapiens 9e-30 137
ENST00000473217 GIT1-002 retained_intron Homo_sapiens 0 1369
ENST00000491377 GIT1-004 retained_intron Homo_sapiens 0 283
ENST00000544838 TCHP-006 nonsense_mediated_decay Homo_sapiens 4e-20 104
ENST00000549524 TCHP-010 retained_intron Homo_sapiens 6e-20 104
ENST00000551209 GIT2-011 protein_coding Homo_sapiens 4e-30 137
ENST00000553118 GIT2-008 protein_coding Homo_sapiens 4e-30 137
ENST00000577466 GIT1-012 protein_coding Homo_sapiens 0 457
ENST00000578266 GIT1-017 protein_coding Homo_sapiens 0 538
ENST00000578670 GIT1-018 nonsense_mediated_decay Homo_sapiens 0 780
ENST00000579536 GIT1-013 retained_intron Homo_sapiens 0 654
ENST00000579937 GIT1-006 protein_coding Homo_sapiens 0 2556
ENST00000581348 GIT1-008 protein_coding Homo_sapiens 0 2222
ENST00000581925 GIT1-014 retained_intron Homo_sapiens 0 669
ENST00000583413 GIT1-015 protein_coding Homo_sapiens 0 641
ENST00000585148 GIT1-016 protein_coding Homo_sapiens 0 374
ENST00000586574 GIT1-019 retained_intron Homo_sapiens 0 547

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