C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tripartite motif containing 16
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000579219 TRIM16-020 ENSG00000221926 9606 - 17:15628648-15642934 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonOvaryTestisENST00000579219
Transcript ID Colon Ovary Testis
ENST00000579219 2.169±0.00 10.632±0.00 3.635±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008QF CIL_0008QF_0001 VISTA 17:15144744-15748248

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000128623 Trim16-005 processed_transcript Mus_musculus 0 636
ENSMUST00000108703 Trim16-002 protein_coding Mus_musculus 0 636
ENSMUST00000055006 Trim16-001 protein_coding Mus_musculus 0 636
ENSMUST00000072639 Trim16-004 protein_coding Mus_musculus 0 429

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