C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: DCC netrin 1 receptor
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000579349 DCC-009 ENSG00000187323 9606 + 18:52752166-52906286 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastKidneyPlacentaENST00000579349
Transcript ID Bladder Breast Kidney Placenta
ENST00000579349 0.464±0.00 0.640±0.00 0.419±0.00 0.060±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008ER CIL_0008ER_0001 VISTA 18:51746215-52348141

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000126030 Dcc-003 retained_intron Mus_musculus 0 274
ENSMUST00000073379 Dcc-002 protein_coding Mus_musculus 0 272
ENSMUST00000114943 Dcc-001 protein_coding Mus_musculus 0 272

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