C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: deleted in colorectal carcinoma
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000114943 Dcc-001 ENSMUSG00000060534 10090 - 18:71258738-72351069 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainLiverOvaryENSMUST00000114943
Transcript ID Adipose Adrenal Bladder Brain Liver Ovary
ENSMUST00000114943 0.090±0.00 0.071±0.02 0.001±0.00 6.794±4.84 0.019±0.00 0.068±0.04

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001764 IMP neuron migration
GO:0001975 IEA response to amphetamine
GO:0003713 IEA transcription coactivator activity
GO:0005042 IEA netrin receptor activity
GO:0005515 IPI protein binding
GO:0005886 TAS plasma membrane
GO:0006915 IEA apoptotic process
GO:0007411 IEA axon guidance
GO:0010976 IEA positive regulation of neuron projection development
GO:0016021 IEA integral component of membrane
GO:0021965 IMP spinal cord ventral commissure morphogenesis
GO:0030424 IDA axon
GO:0032584 IEA growth cone membrane
GO:0033563 IMP dorsal/ventral axon guidance
GO:0033564 IMP anterior/posterior axon guidance
GO:0038007 IEA netrin-activated signaling pathway
GO:0042802 IEA identical protein binding
GO:0045121 IEA membrane raft
GO:0070374 IEA positive regulation of ERK1 and ERK2 cascade
GO:1901214 IEA regulation of neuron death
GO:2001141 IEA regulation of RNA biosynthetic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000304775 DCC-002 nonsense_mediated_decay Homo_sapiens 0 2983
ENST00000372403 KCNMA1-004 protein_coding Homo_sapiens 0.0002 53
ENST00000412726 DCC-201 protein_coding Homo_sapiens 0 5542
ENST00000442544 DCC-001 protein_coding Homo_sapiens 0 6248
ENST00000578080 DCC-004 protein_coding Homo_sapiens 0 374
ENST00000578949 DCC-012 protein_coding Homo_sapiens 0 494
ENST00000579349 DCC-009 nonsense_mediated_decay Homo_sapiens 0 272
ENST00000579666 DCC-005 processed_transcript Homo_sapiens 0 263
ENST00000579702 DCC-016 retained_intron Homo_sapiens 0 411
ENST00000579883 DCC-014 retained_intron Homo_sapiens 0 507
ENST00000579941 DCC-015 protein_coding Homo_sapiens 0 704
ENST00000580024 DCC-010 processed_transcript Homo_sapiens 0 283
ENST00000580146 DCC-013 processed_transcript Homo_sapiens 0 462
ENST00000581559 DCC-003 nonsense_mediated_decay Homo_sapiens 0 268
ENST00000581580 DCC-011 protein_coding Homo_sapiens 0 2104
ENST00000582595 DCC-006 processed_transcript Homo_sapiens 0 204
ENST00000582875 DCC-007 protein_coding Homo_sapiens 0 279
ENST00000584710 DCC-008 processed_transcript Homo_sapiens 0 298

Loading