C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: biogenesis of lysosomal organelles complex-1, subunit 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000579542 BLOC1S2-004 ENSG00000196072 9606 - 10:100280041-100286148 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastColonKidneyOvaryPlacentaTestisENST00000579542
Transcript ID Breast Colon Kidney Ovary Placenta Testis
ENST00000579542 3.589±0.00 5.329±0.00 4.487±0.00 40.315±24.50 16.199±0.00 16.151±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007QB CIL_0007QB_0001 VISTA 10:100185085-100786577
CIL_0005DX CIL_0005DX_0001 CGP 10:100232298-100286712
CIL_0005E2 CIL_0005E2_0001 CGP 10:100273280-100330486

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000079033 Bloc1s2-201 protein_coding Mus_musculus 0 346
ENSMUST00000159853 Gm7241-001 processed_pseudogene Mus_musculus 0 265

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