C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005E2_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000196072-ENSG00000107593 CGP 9606 10:100273280-100330486
GeneTranscriptPositionBiotype
ENSG00000107593 (PKD2L1)
polycystic kidney disease 2-like 1 		ENST00000318222 (PKD2L1-001) 100288154-100330486 protein_coding
ENST00000465680 (PKD2L1-002) 100288160-100329972 protein_coding
ENST00000528248 (PKD2L1-004) 100288396-100329940 nonsense_mediated_decay
ENST00000532547 (PKD2L1-003) 100299635-100330264 nonsense_mediated_decay
CIL_0005E2_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000057506-ENSMUSG00000037578 CGP 10090 19:44139266-44192442
GeneTranscriptPositionBiotype
ENSMUSG00000037578 (Pkd2l1)
polycystic kidney disease 2-like 1 		ENSMUST00000042026 (Pkd2l1-001) 44147637-44192442 protein_coding
ENSMUST00000161357 (Pkd2l1-002) 44147638-44192442 retained_intron
ENSMUSG00000057506 (Bloc1s2)
biogenesis of lysosomal organelles complex-1, subunit 2 		ENSMUST00000079033 (Bloc1s2-201) 44139266-44146446 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005E2_0001ENSG00000107593ENST00000318222ENST00000465680ENST00000528248ENST00000532547CIL_0005E2_0002ENSMUSG00000037578ENSMUST00000042026ENSMUST00000161357ENSMUSG00000057506ENSMUST00000079033
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005E2_0001ENSG00000107593ENST00000318222ENST00000465680ENST00000528248ENST00000532547CIL_0005E2_0002ENSMUSG00000037578ENSMUST00000042026ENSMUST00000161357ENSMUSG00000057506ENSMUST00000079033
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000107593 ENST00000318222 N/A N/A N/A 0.216±0.00 N/A N/A N/A N/A N/A N/A N/A 0.042±0.00 N/A 0.295±0.00
ENST00000465680 N/A 0.315±0.00 N/A N/A N/A 0.809±0.00 N/A N/A 0.178±0.00 N/A N/A 0.850±0.17 0.140±0.01 0.156±0.00
ENST00000528248 0.061±0.00 0.067±0.00 N/A 0.272±0.07 0.029±0.01 N/A 0.030±0.02 0.203±0.04 0.007±0.00 0.035±0.00 0.056±0.00 0.446±0.33 0.068±0.05 0.247±0.01
ENST00000532547 N/A N/A N/A 0.449±0.00 N/A N/A N/A N/A N/A 0.153±0.00 N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000037578 ENSMUST00000042026 0.017±0.00 0.055±0.03 0.013±0.01 0.154±0.00 0.036±0.02 0.051±0.02 N/A 0.008±0.00 0.006±0.00 0.031±0.01 0.014±0.00 0.095±0.04 0.264±0.22 2.501±1.52
ENSMUST00000161357 0.083±0.00 N/A N/A 0.010±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.148±0.00
ENSMUSG00000057506 ENSMUST00000079033 7.385±3.69 8.478±2.14 9.964±1.50 31.788±16.37 7.197±1.80 14.270±6.20 6.252±1.92 10.834±2.13 15.143±4.03 8.954±0.28 8.401±0.48 11.380±5.13 22.389±7.03 21.052±4.34

Loading