C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: gap junction protein, alpha 5, 40kDa
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000579774 GJA5-001 ENSG00000265107 9606 - 1:147756199-147760606 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainColonHeartKidneyMuscleOvaryPlacentaENST00000579774
Transcript ID Bladder Brain Colon Heart Kidney Muscle Ovary Placenta
ENST00000579774 1.351±0.00 0.116±0.00 0.322±0.00 1.083±0.00 0.168±0.00 0.989±0.00 1.033±0.00 92.075±20.76

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000UA CIL_0000UA_0002 CGP 1:147756199-147909257

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001525 IEP angiogenesis
GO:0003151 IMP outflow tract morphogenesis
GO:0003174 IMP mitral valve development
GO:0003193 IMP pulmonary valve formation
GO:0003281 IMP ventricular septum development
GO:0003283 IMP atrial septum development
GO:0005887 IDA integral component of plasma membrane
GO:0005921 IDA gap junction
GO:0005922 IDA connexon complex
GO:0014704 IDA intercalated disc
GO:0016264 IMP gap junction assembly
GO:0048844 ISS artery morphogenesis
GO:0055077 IDA gap junction hemi-channel activity
GO:0055085 IDA transmembrane transport
GO:0055117 IMP regulation of cardiac muscle contraction
GO:0060371 IMP regulation of atrial cardiac muscle cell membrane depolarization
GO:0086014 IMP atrial cardiac muscle cell action potential
GO:0086053 IMP AV node cell to bundle of His cell communication by electrical coupling
GO:0086064 IDA cell communication by electrical coupling involved in cardiac conduction
GO:0086069 IMP bundle of His cell to Purkinje myocyte communication
GO:0086075 IMP gap junction channel activity involved in cardiac conduction electrical coupling
GO:0086077 IDA gap junction channel activity involved in AV node cell-bundle of His cell electrical coupling

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000072600 Gja5-001 protein_coding Mus_musculus 0 970
ENSMUST00000062944 Gja8-201 protein_coding Mus_musculus 0 195

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